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- Numerical Analysis of Dynamical Systems, A.M. Stuart and A.R. Humphries, 685 + xxii pages, Cambridge University Press, Hardback 1996, Paperback 1998.

- Spurious Solutions of Numerical Methods for Initial Value Problems, A.R. Humphries. IMA Journal of Numerical Analysis, 13 (1993), 263-290. pdf
- Runge-Kutta Methods for Dissipative and Gradient Dynamical Systems, A.R. Humphries and A.M. Stuart. SIAM Journal on Numerical Analysis, 31 (1994), 1452-1485. pdf
- Model Problems in Numerical Stability Theory for Initial Value Problems, A.M. Stuart and A.R. Humphries. SIAM Review, 36 (1994), 226-257. pdf
- The Essential Stability of Local Error Control for Dynamical Systems, A.M. Stuart and A.R. Humphries. SIAM Journal on Numerical Analysis, 32 (1995) 1940-1971. pdf
- Adaptive Methods for semi-linear elliptic equations with
critical exponents and interior singularities, C.J. Budd and A.R. Humphries.
*Applied Numerical Mathematics*26 (1998) 227-240. pdf - Weak Finite Dimensional Approximations of Semi-Linear
Elliptic PDEs With Near Critical Exponents, C.J. Budd and A.R. Humphries.
*Asymptotic Analysis 17 (1998) 185-220.*pdf - The finite element approximation of Semi-linear Elliptic
PDEs with Critical Sobolev Exponents in the cube, C.J. Budd, A.R. Humphries and A.J.
Wathen.
*SIAM Journal on Scientific Computing 20, (1999) 1875-1904.*pdf - Phase Space Error Control for Dynamical Systems, D.J.
Higham, A.R. Humphries and R.J. Wain,
*SIAM Journal on Scientific Computing 21, (2000) 2275-2294.*pdf - Mosaic
solutions and Entropy for Spatially Discrete Cahn-Hilliard
Equations, K.A. Abell, A.R. Humphries and E.S. Van Vleck,
*IMA Journal of Applied Mathematics 65 (2000) 219-255.*pdf - Mosaic
solutions and Entropy for Spatially Discrete Coupled Phase Transition
Equations, K.A. Abell, A.R. Humphries and E.S. Van Vleck,
*Physica D, 155 (2001), 274-310*. - Numerical
and analytical estimates of existence regions
for Semi-linear Elliptic equations with Critical Sobolev
Exponents in cuboid and cylindrical domains, C.J. Budd and A.R. Humphries.
*Journal of Computational and Applied Mathematics 151 (2003), 59-84*. open archive pdf - Phase Space Stability Error Control with Variable Time-stepping Runge-Kutta Methods for Dynamical Systems, A.R. Humphries and R. Vigneswaran,
*Applied Numerical Analysis & Computational Mathematics 1 (2004) 469-488.* - Computation of Mixed Type Functional Differential Boundary Value Problems,
K.A. Abell, C.E. Elmer, A.R. Humphries and E.S. Van Vleck.
*SIAM Journal on Applied Dynamical Systems, 4 (2005) 755-781.*pdf - Electromagnetic
two-body problem: recurrent dynamics in the presence of state-dependent delay, J. De Luca, N. Guglielmi, A.R. Humphries and A. Politi.
*Journal of Physics A, 43 (2010) 205103 (22 pages)*. - Front Solutions for Bistable
Differential-Difference Equations with
Inhomogeneous Diffusion, A.R. Humphries, B.E. Moore, and E.S. van Vleck.
*SIAM Journal on Applied Mathematics, 71 (2011) 1374-1400.*pdf - Dynamics of a Delay Differential Equation With Multiple State Dependent Delays,
A.R. Humphries, O.A. DeMasi, F.M.G. Magpantay and F. Upham.
*Discrete & Continuous Dynamical Systems - A, 32 (2012) 2701 - 2727.* - Finite Element Boundary Value Integration of
Wheeler-Feynman Electrodynamics, J. De Luca, A.R. Humphries, and S.B. Rodrigues,
*Journal of Computational and Applied Mathematics, 236 (2012), 3319-3337.*open archive pdf - Boundary-Value Problem Formulations for Computing Invariant Manifolds and Connecting Orbits in the Circular Restricted Three Body Problem,
R.C. Calleja, E.J. Doedel, A.R. Humphries, A. Lemus, B.E. Oldeman,
*Celestial Mechanics and Dynamical Astronomy, 114 (2012) 77 - 106.*SharedIt pdf - Synchronization in ecological systems by weak dispersal coupling with time delay,
E. Wall, F. Guichard and A.R. Humphries,
*Theoretical Ecology, 6 (2013), 405-418.*SharedIt pdf -
Neutrophil dynamics during concurrent chemotherapy and G-CSF administration: Mathematical
modelling guides dose optimisation to minimise neutropenia,
M. Craig, A.R. Humphries, J. Bélair, J. Li, M.C. Mackey, and F. Nekka.
*Journal of Theoretical Biology, 385 (2015) 77-89 .* -
Periodic Solutions of a Singularly Perturbed Delay Differential Equation With Two State-Dependent Delays,
A.R. Humphries, D.A. Bernucci, R. Calleja, N. Homayounfar and M. Snarski.
*Journal of Dynamics and Differential Equations, 28 (2016) 1215-1263.*SharedIt pdf -
A mathematical model of granulopoiesis
incorporating the negative feedback dynamics
and kinetics of G-CSF/neutrophil binding and
internalisation,
M. Craig, A.R. Humphries and M.C. Mackey.
*Bulletin of Mathematical Biology*, 78 (2016) 2304-2357. SharedIt pdf -
An upper bound
for the half-removal time of neutrophils from circulation,
M. Craig, A.R. Humphries and M.C. Mackey.
*Blood*, 128 (2016), 1989-1991. pdf - Normal and pathological dynamics of platelets in humans,
G. Provencher Langlois, M. Craig, A.R. Humphries, M.C. Mackey, J.M. Mahaffy, J. Bélair, T. Moulin, S.R. Sinclair and L. Wang.
*Journal of Mathematical Biology*, 75 (2017), 1411-1462. SharedIt pdf - Resonance phenomena in a scalar delay differential equation with two state-dependent delays, R.C. Calleja, A.R. Humphries and B. Krauskopf.
*SIAM Journal on Applied Dynamical Systems*, 16 (2017), 1474-1513. pdf -
Transit and lifespan in neutrophil production: implications for drug intervention,
D. Camara de Souza, M. Craig, T. Cassidy, J. Li, F. Nekka, J. Bélair and A.R. Humphries.
*Journal of Pharmacokinetics and Pharmacodynamics*, 45 (2018), 59-77. SharedIt pdf -
Dynamics of a Mathematical Hematopoietic Stem-Cell Population Model,
D. Camara de Souza and A.R. Humphries.
*SIAM Journal on Applied Dynamical Systems*, 18 (2019), 808-852. pdf -
Equivalences Between Age Structured Models and State Dependent Distributed Delay Differential Equations,
T. Cassidy, M. Craig and A.R. Humphries.
*Mathematical Biosciences and Engineering*,**16**(2019), 5419-5450. open access pdf -
Generalised Lyapunov-Razumikhin techniques for scalar state-dependent delay differential equations,
F.M.G. Magpantay and A.R. Humphries.
*Discrete & Continuous Dynamical Systems - S*,**13**(2020) 85-104. open access pdf -
A mathematical model of viral oncology as an immuno-oncology instigator,
T. Cassidy and A.R. Humphries.
*Mathematical Medicine and Biology*,**37**(2020), 117-151. pdf -
Characterizing chemotherapy-induced neutropenia and monocytopenia through mathematical modelling,
T. Cassidy, A.R. Humphries, M. Craig and M.C. Mackey.
*Bulletin of Mathematical Biology*,**82**, 104 (2020). SharedIt pdf

- Approximation of Dissipative Partial Differential Equations over Long Time Intervals, 180-207 in Numerical Analysis, 1993, Proceedings of the 15th Dundee Numerical Analysis Conference, June-July 1993", (eds. DF Griffiths and GA Watson), Longman, 1994, AR Humphries, DA Jones and A.M. Stuart.
- Finite Element Method Solutions for Semi-linear Elliptic PDEs with Critical Sobolev Exponents on Non-spherical 3D Domains, A.R. Humphries, C.J. Budd and Wathen, 418--425 in LT MagalhÃ£es, C Rocha and L Sanchez, editors, Equadiff 95 Proceedings of the International Conference on Differential Equations, World Scientific, 1998.
- Deterministic and Random Dynamical Systems: Theory and Numerics, A.R. Humphries and A.M. Stuart. In Modern Methods in Scientific Computing and Applications, NATO Science Series II, volume 75, Kluwer Academic Publishers, 2002.
- Efficient accurate non-iterative breaking point
detection and computation for state-dependent delay differential equations., A. Eremin and A.R. Humphries.
12
^{th}International Conference on Numerical Analysis and Applied Mathematics: ICNAAM 2014.*AIP Conference Proceedings 1648, (2015) 150006.* - Some issues with the numerical treatment of delay differential equations., A.S. Eremin, A.R. Humphries and A.A. Lobaskin.
International Conference on Numerical Analysis and
Applied Mathematics: ICNAAM 2019.
*AIP Conference Proceedings 2293, (2020) 100003.*

- A.R. Humphries and F.M.G. Magpantay. Lyapunov-Razumikhin techniques for state-dependent delay differential equations, 2020. arXiv:1507.00141v4 [math.DS]

- A.R. Humphries and N. Christodoulou. Phase Space Error Control for Dynamical Systems, II. University of Sussex, Centre for Mathematical Analysis and its Applications Research Report no CMAIA00-13, 2000.
- A.R. Humphries and R.P. Wilds. Traveling wave solutions of lattice differential equations through an embedding approach, 2006.