Publications
* Students or postdocs + (Co-)corresponding author
Preprint
Structured Learning in Time-dependent Cox Models
Wang, G.*+, Lian, Y.*, Yang, AY.+, Platt, RW., Wang, R., Perreault, S., Dorais, M. and Schnitzer, ME.
A High-dimensional Model for Identifying Regional Methylation QTLs
Zhao, K., Yang, AY., Oualkacha, K., Zeng, Y., Klein, K., Hudson, M., Colmegna, I., Bernatsky, S. and Greenwood, C.
2024
Machine Learning Informed Diagnosis for Congenital Heart Disease in Large Claims Data Source
[pdf]
Marelli, AJ., Li, C., Liu, A., Nguyen, H., Moroz, H., Brophy, JM., Guo, L., Buckeridge, DL., Tang, J., Yang, AY. and Li, Y.
JACC: Advances
2023
Variable Selection in High Dimensions for Discrete-outcome Individualized Treatment Rules: A Case Study in Reducing Severity of Depression Symptoms
[pdf]
[supplementary materials]
Moodie, EEM., Bian, Z., Coulombe, J., Lian, Y.*, Yang AY., and Shortreed, S.
Biostatistics
A Sparse Additive Model for High-Dimensional Interactions with An Exposure Variable
[pdf]
[supplementary materials] [software]
Bhatnagar, SR.*, Lu, T., Lovato, A., Olds, DL., Kobor, MS., Meaney, MJ., O'Donnell, K., Yang, AY., and Greenwood, CMT.
Computational Statistics and Data Analysis
2022
Dissecting the Impact of Molecular T-cell HLA Mismatches in Kidney Transplant Failure: a Retrospective Cohort Study
Lemieux, W., Fleischer, D.*, Yang, AY., Niemann, M., Oualkacha, K., Klement, W., Richard, L., Polychronakos, C., Liwski, R., Claas, F., Gebel, H., Keown, P., Lewin, A., Sapir-Pichhadze, R.
[pdf]
[supplementary materials]
Frontiers in Immunology
2021
Recurrent Disease Progression Networks for Modelling Risk Trajectory of Heart Failure
[pdf]
Lu, X., Liu, A., Fuh, S., Lian, Y.*, Guo, L., Yang, Y., Marelli, A., and Li, Y.
PLOS ONE
On Path to Informing Hierarchy of Eplet Mismatches as Determinants of Kidney Transplant Loss
[pdf]
Mohammad, H., Oualkacha, K., Zhang, W., Klement, W., Bourdiec, A., Lamsatfi, J., Yang, Y., Foster, B., Keown, P., Gebel, H., Claas, F., and Sapir-Pichhadze, R.
Kidney International Reports
2020
Simultaneous SNP Selection and Adjustment for Population Structure in High Dimensional Prediction Models
[pdf]
[software]
Bhatnagar, SR.*, Yang, Y., Lu, T., Schurr, E., Loredo-Osti, JC, Forest, M., Oualkacha, K., and Greenwood, CMT.
PLOS Genetics
Machine Learning to Automate Clinician Designed Empirical Manual for Congenital Heart Disease Identification in Large Claims Database
[abstract]
Marelli, A., Li, C., Liu, A., Nguyen, H., Brophy, J., Guo, L., Buckeridge, D., Tang, J., Pineau, J., Yang, Y., and Li, Y.*
Machine Learning for Healthcare (MLHC)
2019
2018
An Analytic Approach for Interpretable Predictive Models in High Dimensional Data in the Presence of Interactions with Exposures
[pdf]
[supplementary materials]
[software]
Bhatnagar, SR.*, Yang, Y., Khundrakpam, B., Evans, AC., Blanchette, M., Bouchard, L., and Greenwood, CMT.
Genetic Epidemiology
2016
2015
2014
2013
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